Posts by Tag

R

Integrating qsub with RStudio

10 minute read

In a previous post, I explained how to run RStudio on the compute nodes of the HPC. I am going to continue on this theme and explore some of the interesting ...

monitauR ๐Ÿฎ

3 minute read

Introducing MonitauR, a package to easily and remotely monitor the progress of your R scripts.

RStudio on the HPC

1 minute read

This post details how to get RStudio server running on the compute nodes of the HPC. This is achieved though a combination of singularity and ssh commands. ...

Vectorising chisq.test()

4 minute read

Writing fast code is actually about writing efficient code. Writing code in R doesnโ€™t magically make electrons slower. The perceived slowness of higher-level...

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workflow

Integrating qsub with RStudio

10 minute read

In a previous post, I explained how to run RStudio on the compute nodes of the HPC. I am going to continue on this theme and explore some of the interesting ...

RStudio on the HPC

1 minute read

This post details how to get RStudio server running on the compute nodes of the HPC. This is achieved though a combination of singularity and ssh commands. ...

Using VScode to access the HPC

2 minute read

One of the biggest hurdles to using a high performance computer (HPC) is the user interface. Researchers have to ssh into the HPC via the command line. This ...

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package

monitauR ๐Ÿฎ

3 minute read

Introducing MonitauR, a package to easily and remotely monitor the progress of your R scripts.

pyoinformatics ๐Ÿ

1 minute read

Introducing pyoinformatics, a simple bioinformatics package. pip install pyoinformatics Iโ€™m working on the bioinformatics problems on rosalind.info. Some o...

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HPC

Integrating qsub with RStudio

10 minute read

In a previous post, I explained how to run RStudio on the compute nodes of the HPC. I am going to continue on this theme and explore some of the interesting ...

RStudio on the HPC

1 minute read

This post details how to get RStudio server running on the compute nodes of the HPC. This is achieved though a combination of singularity and ssh commands. ...

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hpc

Using VScode to access the HPC

2 minute read

One of the biggest hurdles to using a high performance computer (HPC) is the user interface. Researchers have to ssh into the HPC via the command line. This ...

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statistics

Vectorising chisq.test()

4 minute read

Writing fast code is actually about writing efficient code. Writing code in R doesnโ€™t magically make electrons slower. The perceived slowness of higher-level...

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singularity

RStudio on the HPC

1 minute read

This post details how to get RStudio server running on the compute nodes of the HPC. This is achieved though a combination of singularity and ssh commands. ...

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p5js

Interactive diagnostic test statistics

2 minute read

Iโ€™ve been watching a lot of coding train, and it has got me keen to do something with the javascipt library P5.js. My housemate has been learning about diagn...

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diagnostics

Interactive diagnostic test statistics

2 minute read

Iโ€™ve been watching a lot of coding train, and it has got me keen to do something with the javascipt library P5.js. My housemate has been learning about diagn...

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learning

Interactive diagnostic test statistics

2 minute read

Iโ€™ve been watching a lot of coding train, and it has got me keen to do something with the javascipt library P5.js. My housemate has been learning about diagn...

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webapp

Interactive diagnostic test statistics

2 minute read

Iโ€™ve been watching a lot of coding train, and it has got me keen to do something with the javascipt library P5.js. My housemate has been learning about diagn...

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CI/CD

pyoinformatics ๐Ÿ

1 minute read

Introducing pyoinformatics, a simple bioinformatics package. pip install pyoinformatics Iโ€™m working on the bioinformatics problems on rosalind.info. Some o...

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bioinformatics

pyoinformatics ๐Ÿ

1 minute read

Introducing pyoinformatics, a simple bioinformatics package. pip install pyoinformatics Iโ€™m working on the bioinformatics problems on rosalind.info. Some o...

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rosalind

pyoinformatics ๐Ÿ

1 minute read

Introducing pyoinformatics, a simple bioinformatics package. pip install pyoinformatics Iโ€™m working on the bioinformatics problems on rosalind.info. Some o...

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optimisation

Vectorising chisq.test()

4 minute read

Writing fast code is actually about writing efficient code. Writing code in R doesnโ€™t magically make electrons slower. The perceived slowness of higher-level...

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Virology

Your Virologist Friend

4 minute read

Here are a few post Iโ€™ve made about the ongoing pandemic. 20th of October 2021 - Vaccines We are marching towards reopening, however, when we do everything...

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Covid

Your Virologist Friend

4 minute read

Here are a few post Iโ€™ve made about the ongoing pandemic. 20th of October 2021 - Vaccines We are marching towards reopening, however, when we do everything...

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