RStudio on the HPC
This post details how to get RStudio server running on the compute nodes of the HPC. This is achieved though a combination of singularity and ssh commands. ...
Recent Posts
Vectorising chisq.test()
Writing fast code is actually about writing efficient code. Writing code in R doesn’t magically make electrons slower. The perceived slowness of higher-level...
Using VScode to access the HPC
One of the biggest hurdles to using a high performance computer (HPC) is the user interface. Researchers have to ssh into the HPC via the command line. This ...
pyoinformatics 🐍
Introducing pyoinformatics, a simple bioinformatics package. pip install pyoinformatics I’m working on the bioinformatics problems on rosalind.info. Some o...
Interactive diagnostic test statistics
I’ve been watching a lot of coding train, and it has got me keen to do something with the javascipt library P5.js. My housemate has been learning about diagn...